A cluster model deletes the protein outside the active-site fragment. QM/MM keeps that protein and couples it to the quantum region. The methods sentence has to say which calculation was run.
Oct 23, 2026
ORCA reports the electrons of a ligand. This note maps each common calculation onto the question it can answer, and onto the binding claim it cannot carry.
Jul 7, 2026
Learn how to use Density Functional Theory (DFT) to validate docking poses, estimate strain energies, and gain quantum insights into ligand binding.
Oct 27, 2023