Projects

BioLatent
BioLatent

An open-access registry, selection wizard, and interactive benchmark dashboard for chemical and biological vector representations. Indexes foundation models across five modalities: small molecules, proteins, complexes, chemical reactions, and nucleic acids, with a programmatic JSON API.

Jul 16, 2026

Learn CADD
Learn CADD

An interactive, visual, first-principles web guide to computer-aided drug design. Covers 18 modules across ligand-receptor binding, molecular docking, pharmacophore modeling, QSAR, molecular dynamics, generative design, and ADMET prediction, each with hands-on browser playgrounds.

Jun 24, 2026

QSARBoost
QSARBoost

A flexible Python framework for building, validating, and applying gradient boosting-based QSAR models, with built-in support for molecular fingerprints, hyperparameter optimization, and model interpretation.

Aug 9, 2025

VinaScreen
VinaScreen

An automated Python script for structure-based virtual screening with AutoDock Vina, handling batch ligand preparation, parallel docking, and result parsing for large compound libraries.

Nov 7, 2024

QSARBioPred
QSARBioPred

A Jupyter Notebook pipeline for building QSAR classification models for bioactivity prediction, supporting descriptor calculation, feature selection, model training, and applicability domain assessment.

Feb 20, 2024

EnsembleBBB
EnsembleBBB

A machine learning ensemble model for predicting drug blood-brain barrier permeability, deployed as an interactive Streamlit web application for rapid compound screening.

Feb 13, 2024

Awesome Drug Discovery
Awesome Drug Discovery

A curated resource list of computational methods for drug discovery, covering molecular modeling tools, machine learning frameworks, databases, and open-source pipelines organized by application area.

Jan 16, 2024

ArtemisiaDB
ArtemisiaDB

A curated database of secondary metabolites isolated from Artemisia L. species, providing chemical structures, molecular properties, and screening-ready compound libraries for virtual screening campaigns against therapeutic targets.

Feb 28, 2022

CoumarinDB
CoumarinDB

A manually curated database of naturally occurring coumarins, compiling chemical structures, physicochemical descriptors, and source organism data to support computational screening and structure-activity studies.

Jan 20, 2022